Does Metronidazole Cause Dark Urine?

In our latest question and answer, our pharmacist discusses how metronidazole can cause urine discoloration.

Question

Hi. I was recently prescribed Flagyl 500mg 2x/day for a week. I have had this before and developed a persistent infection in my throat, so my doctor also gave me two doses of Diflucan as a precaution. I started the Flagyl Friday night. I took the first dose of Diflucan yesterday. The second I will take tomorrow. My concern is despite drinking plenty of water, my urine is super dark. Like a shade beyond apple juice. I also had the stomach flu this week (before and during this medication). I’m exhausted and have no energy, but that was true from the start of the flu, before the medicine. Should I stop taking the Flagyl? Do I need to see a doctor?

Asked by Cat On Sep 25, 2022

Answered by
Medical Content Reviewed By HelloPharmacist Staff

Published Sep 25, 2022
Last updated Apr 19, 2024

Key points

  • A fairly common side effect of Flagyl (metronidazole) is dark urine. There is no clinical significance to this side effect and the drug can be continued as normal.
  • Other common causes of dark urine include dehydration and certain foods. There are some less common reasons why your urine may be dark, so it's important to talk to your doctor about your symptoms.

Answer

Flagyl (metronidazole) is well known to cause urine discoloration (darkened urine), so what you are experiencing is a possible side effect of the drug.

Why Does Metronidazole Cause Dark Urine?

It is unknown exactly why discoloration can occur. Elimination of metronidazole and its metabolites occurs mainly via the urine (over 60% of the dose) and it is thought that the occurrence of darkened urine is most likely due to a metabolite of the drug. There does not appear to be any clinical significance to this side effect. 

The prescribing information for Flagyl ER (metronidazole extended-release) puts the incidence of urine discoloration at 3%, so it certainly isn't uncommon. If metronidazole is the reason in your case, there is no need to worry.

In addition to urine discoloration, metronidazole may cause other urinary symptoms as well. These could include painful urination, increased urinary frequency, and a sense of pelvic pressure. 

Fluconazole isn't typically associated with darkened urine so metronidazole is most likely the culprit.

Other Considerations

Darkened urine is certainly a symptom of being dehydrated, but it doesn't necessarily mean that you are. As mentioned above, metronidazole may be the reason. As you also have the flu, it is important to stay hydrated and report any unusual or severe symptoms to your doctor.

It's also important to point out that dark urine is a fairly non-specific symptom. While the most common causes are dehydration and drugs (such as metronidazole in your case), it could be a symptom of something more serious (such as kidney or liver damage).

It's never a bad idea to talk to your doctor about what you are experiencing as they have your full medical history.

Final Words

Thanks so much for reaching out to us!

References

About the Pharmacist

Dr. Brian Staiger, PharmD

Dr. Brian has been practicing pharmacy for over 13 years and has wide-ranging experiences in many different areas of the profession. From retail, clinical, program development, and administrative responsibilities, he's your knowledgeable and go-to source for all your pharmacy and medication-related questions! Dr. Brian Staiger also has herbalist training and educational certificates in the field of medical ethnobotany. Feel free to send him an email at [email protected]! You can also connect with Dr. Brian Staiger on LinkedIn.

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