Switching From Clindamycin To Azithromycin After Experiencing Diarrhea

In our latest question and answer, the pharmacist discusses concerns with clindamycin causing diarrhea and if azithromycin could do the same.

3 min read Updated Jun 2026 Read by 1,665 people
Switching From Clindamycin To Azithromycin After Experiencing Diarrhea
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Patches asked

I took clindamycin HCL 150mg about 6 months ago and I had severe diarrhea within 20 minutes, and it continued so I had to stop. Is this an indicator that it will happen again when I have now been prescribed a Z-Pack 250mg (azithromycin)? I am very concerned. Please reply, thank you!

Jan 06, 2023
The quick answer
  • Clindamycin is one of the antibiotics most likely to cause diarrhea, affecting at least 20% of people who take it. Azithromycin is generally better tolerated than clindamycin and causes gastrointestinal side effects less often and less severely. Having diarrhea with clindamycin does not mean you will experience it with azithromycin, and taking azithromycin with food may help reduce gastrointestinal side effects.
A quick summary of Dr. Brian Staiger, PharmD's full answer below, condensed by AI from that answer only (not from any outside source). The pharmacist's answer is the source of record.
Medications in this answer — tap to explore

Answer

Thanks for reaching out! Experiencing diarrhea while taking an antibiotic, especially clindamycin, is a fairly common side effect. 

In fact, among antibiotics, clindamycin is generally associated as one of the most likely ones to cause diarrhea and clinical studies involving the drug have reported the side effect in at least 20% of those taking the drug.

Clindamycin Causing Clostridium Difficile Associated Diarrhea

Now, and this is an important point, even though diarrhea with clindamycin is common, if you notice a more severe form of it, it may be due to a less common, but serious, side effect of clindamycin, a C.diff infection. 

Clostridium difficile (also known as C. diff) is a type of bacteria that can cause severe diarrhea and other digestive problems. This type of bacteria can sometimes proliferate in those who have recently taken antibiotics, especially clindamycin.

As mentioned, if you experience a more severe form of diarrhea while taking clindamycin, and you are also experiencing associated side effects, such as bloody stools, abdominal pain, cramping, fever, and loss of appetite, it is important to see a doctor as soon as possible for proper diagnosis and treatment.

You said you started experiencing diarrhea with clindamycin within 20 minutes after taking a dose, so you likely didn't have a Clostridium difficile infection. It usually only happens with prolonged use. Regardless, I thought it was an important topic to cover here.

Switching To Azithromycin

Antibiotic-associated diarrhea is typically reported as the primary reason antibiotics are discontinued. If it occurs, an alternative is generally used and azithromycin often fits the bill as an appropriate alternative (depending on what you're treating).

Even though clindamycin and azithromycin share a similar name (sharing 'mycin' at the end), and work similarly, they are in different drug classes and have different properties.

Clindamycin is classified as a 'lincosamide antibiotic' while azithromycin is a 'macrolide antibiotic' and a derivative of erythromycin.

Among their many differences, one is their overall tolerability.

Azithromycin is generally far better tolerated than clindamycin in regard to their gastrointestinal side effects.

Azithromycin can certainly still cause nausea, diarrhea, and upset stomach etc..., but generally it is less common, and less severe than clindamycin.

Does Having Diarrhea With Clindamycin Put You More At Risk?

You specifically asked in your question if there was an indicator that you will experience diarrhea on azithromycin having had the problem with clindamycin.

The answer here is that there really isn't a specific indicator unfortunately. Having experienced diarrhea with clindamycin isn't considered an indicator you will experience it with azithromycin.

Although we aren't talking about allergies here, I think it's important to bring up that most studies find that clindamycin is not thought to have a cross-reactivity risk with other antibiotics.

In other words, in those allergic to clindamycin, they don't appear to be any more at risk to having an allergic reaction to other antibiotics.

You certainly may be someone who just is more susceptible to the gastrointestinal side effects of taking prescription medication, or you could have some kind of underlying sensitivity that would be a challenge to definitively know.

Reduce The Risk & Severity Of Gastrointestinal Side Effects With Azithromycin

Although results from studies are mixed, antibiotic associated diarrhea may be due to the drugs eradicating 'good' gut bacteria. Sometimes, a probiotic supplement can help here and it may be an option for you to try.

Additionally, be sure to take the antibiotic with food. This can help as well.

Final Words

I hope this answer helped provide some of the information you were looking for!

Please feel free to reach back out again anytime.

References & sources
  1. Cleocin Prescribing Information — Pfizer
  2. Macrolide Allergic Reactions — PubMed
  3. Reactions Associated With Aminoglycosides, Clindamycin, Linezolid, and Metronidazole — U.S. Pharmacist
  4. Hypersensitivity reactions to non beta-lactam antimicrobial agents, a statement of the WAO special committee on drug allergy — BMC
  5. Allergic Cross-reactivity of Select Antimicrobials — UC Davis
Glossary — Terms in This Answer
Antibiotic
A medication that kills bacteria or stops their growth to treat infections.
Clindamycin
A specific antibiotic medication that is commonly associated with causing diarrhea as a side effect.
Clostridium difficile
A type of bacteria that can multiply in the gut after antibiotic use and cause severe diarrhea.
Azithromycin
An alternative antibiotic medication that is generally better tolerated and causes fewer gastrointestinal side effects than clindamycin.
Macrolide antibiotic
A class of antibiotics that includes azithromycin and works by stopping bacterial growth.
Lincosamide antibiotic
A class of antibiotics that includes clindamycin and is known for higher rates of gastrointestinal side effects.
Cross-reactivity
The likelihood that an allergic reaction to one medication will also occur with a similar medication.
Probiotic
A supplement containing beneficial bacteria that may help restore healthy gut bacteria damaged by antibiotics.
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Dr. Brian Staiger, PharmD
About the pharmacist

Dr. Brian Staiger, PharmD

Clinical Pharmacy

Doctor of Pharmacy, board certified clinical pharmacist (BCPS), American Herbalist Guild, Medication Therapy Management certified

Brian Staiger, PharmD, BCPS, is a licensed pharmacist with more than 13 years of experience across retail pharmacy, clinical pharmacy, medication safety, pharmacy program development, and healthcare administration. He is the founder of HelloPharmacist.com, where he helps patients...

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